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View Structure Prediction Details

Protein: CE31708
Organism: Caenorhabditis elegans
Length: 442 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE31708.

Description E-value Query
Range
Subject
Range
gi|157757157 - gi|157757157|ref|XP_001670922.1| Hypothetical protein CBG19875 [Caenorhabditis briggsae AF16]
gi|39588311, gi|... - gi|39588311|emb|CAE72662.1| Hypothetical protein CBG19875 [Caenorhabditis briggsae], gi|187023687|em...
893.0 [0..1] [442..1]

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Predicted Domain #1
Region A:
Residues: [1-192]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFAIAHNSIL RDSLAGILQL SPERVFDEYR PPPFTGNIVV GVEDLRDANL RFAVRYFLAN  60
   61 VEKSISLFIV KQEWSENDEK FFDDLVKTEY RRAHDLNQVA IDRVNKLPDN EWKSDRLEQL 120
  121 NEWRTIPAIN YSLLTLNDNL KNQIDALAKV TPCTISDDEE QITNKPPVLH WTADPLEGEI 180
  181 QFIAQLNFPL SG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [193-356]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PDDSSFREIC RLLKPHFETS YEWTGGILLT SDPVRLHVQR FNDTQIELAA RICVDELEGD  60
   61 EADRPIRFIW PYLAVSLKQA LQVLGEHPHL QYSISFVPFG SIFFKSSEIE ARVFDATVFC 120
  121 STALKYDKVG FRVGEDVHHV DIAHIFPDGT YPSLSRLLSM NPPS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [357-442]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PRFSRPESVN DSVSPSLMSE PPTPGGLVAP HNRGRRVSFG TIKLMSDGPT TPEIPILNGN  60
   61 SNDGSAKTVD AFIDKMLQQT MDQLAV

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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