Protein: | rcn-1 |
Organism: | Caenorhabditis elegans |
Length: | 207 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for rcn-1.
Description | E-value | Query Range |
Subject Range |
|
306.0 | [0..12] | [204..39] |
Region A: Residues: [1-207] |
1 11 21 31 41 51 | | | | | | 1 MVADNSEKST KSVANGSLIS TVSSKDDLPN AIIVTQVPED VFDNKQDKAN FSSLFTQIEK 60 61 DIHFDFLRSF RRVRVIFSSP ENATAAKLIV QGFSFKGHEL KAFFAQRIYM SANSQMLSPP 120 121 PLEKQFLISP PCSPPVGWEQ TKDMPPVVCN FDLMARLASF AIDEKYEVHN GDELTPAIIV 180 181 HPCETPIDVP SAIEMPRTPR PSSPCEQ |
Detection Method: | ![]() |
Confidence: | 35.30103 |
Match: | 1weyA |
Description: | Solution structure of RRM domain in calcipressin 1 |
Matching Structure (courtesy of the PDB):![]() |
Term | Confidence | Notes |
binding | 2.30438455421982 | bayes_pls_golite062009 |
nucleic acid binding | 1.56594485731437 | bayes_pls_golite062009 |
protein binding | 0.403675976995418 | bayes_pls_golite062009 |
RNA binding | 0.299180957062386 | bayes_pls_golite062009 |