| Protein: | rcn-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 207 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for rcn-1.
| Description | E-value | Query Range |
Subject Range |
|
|
306.0 | [0..12] | [204..39] |
|
Region A: Residues: [1-207] |
1 11 21 31 41 51
| | | | | |
1 MVADNSEKST KSVANGSLIS TVSSKDDLPN AIIVTQVPED VFDNKQDKAN FSSLFTQIEK 60
61 DIHFDFLRSF RRVRVIFSSP ENATAAKLIV QGFSFKGHEL KAFFAQRIYM SANSQMLSPP 120
121 PLEKQFLISP PCSPPVGWEQ TKDMPPVVCN FDLMARLASF AIDEKYEVHN GDELTPAIIV 180
181 HPCETPIDVP SAIEMPRTPR PSSPCEQ
|
| Detection Method: |  |
| Confidence: | 35.30103 |
| Match: | 1weyA |
| Description: | Solution structure of RRM domain in calcipressin 1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.30438455421982 | bayes_pls_golite062009 |
| nucleic acid binding | 1.56594485731437 | bayes_pls_golite062009 |
| protein binding | 0.403675976995418 | bayes_pls_golite062009 |
| RNA binding | 0.299180957062386 | bayes_pls_golite062009 |
