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View Structure Prediction Details

Protein: CE31538
Organism: Caenorhabditis elegans
Length: 554 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE31538.

Description E-value Query
Range
Subject
Range
gi|73968841 - gi|73968841|ref|XP_538313.2| PREDICTED: similar to CG3309-PA [Canis familiaris]
458.0 [0..6] [543..78]

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Predicted Domain #1
Region A:
Residues: [1-169]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEPDIEPWDR FRDWLHCICV VTFDLELGQA LEVIYPGDAI LSNTEKINIC YLAFPDSNSS  60
   61 NARDTNFHFR IRRAISDVRD CQKSFVDKSP TSLPFDTHYL YGFVHFRQCK DPTIHRGYYQ 120
  121 KSIVLMSVLP LFSLFYSVTA RIAEHFFESG EAAIEAACHH IDTWQQPHA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [170-352]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GRTIELPLLG TLISCRLPAA CDLPYEFRLD GHVELSDDDS QRLVRPDFTT SIVQHVHHLP  60
   61 LLWELVLLGE PLLIVAPTPS ITSALVQSIV GLLSPLRIVN DFRPYFTIHD SEFREYSSKS 120
  121 RSPPRVILGV TNPFFIKALD HWPHILKVAE QGAEIGGDDM KKPKKTWSSS RTLDTPAGLY 180
  181 TQY

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [353-554]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KPFLSKDKSL AKKLLRSGNS LEVQHNILQR HFLELTHSFM IPMERYLSSL MPLKKEMSPF  60
   61 KGIPSTRPFS MDDFLATLET NGGPSLTCGT KGDWQGLYRR FITCSNFGGW LSMRSRDVNA 120
  121 QLKTHYVEAL CSADFCSQTL ATKHNVEIVD LVLRIRERII ECPPDTEIRR NLVRQVVKIL 180
  181 SNVDDDLKQL LMSNCSLREI LA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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