| Protein: | lgc-47 |
| Organism: | Caenorhabditis elegans |
| Length: | 428 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for lgc-47.
| Description | E-value | Query Range |
Subject Range |
|
|
322.0 | [0..27] | [403..70] |
|
Region A: Residues: [1-428] |
1 11 21 31 41 51
| | | | | |
1 MPPSFVTQNT KTTRIQSFTM LSTLFLLLYA TRETVNAMTA EISPTVSYLL DRGCANDTEI 60
61 IDHLLIDRAL YYNKHKLPSP QVDVRIEMWV QEVTSVSELT QDFEIDLYMN EYWTDPGLAY 120
121 DILNPCQGNL SFDWAVMQNI WTPNTCFINS KKAQLHSSPF TNVFLMVFPN GSVWSNWRIK 180
181 STGPCVMDLT KFPMDSIECT LTFESFNYNK DEVFMRWGDP PLTIFKPIEL PDFTMTNFST 240
241 SNKFQLYAAG YWSELNVNFL FRRRSGWYLL QGYIPTYMTV FISWIPFYLG PKAIPARTMI 300
301 GVNALLALTF QFGNIIRNLP RVSYIKAIDV WMLSGICFVF ASLFELATIG FLMRNEGKPA 360
361 TKSSRSTKNS NRWQQPSVCR EDTQRKSQNI VFCERLDNTS RLMFPVVFTF YNFIYWFVYM 420
421 KQAWDQAP
|
| Detection Method: |  |
| Confidence: | 69.522879 |
| Match: | 2bg9A |
| Description: | Refined structure of the nicotinic acetylcholine receptor at 4A resolution. |
Matching Structure (courtesy of the PDB): |
|
