| Protein: | lgc-47 |
| Organism: | Caenorhabditis elegans |
| Length: | 409 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for lgc-47.
| Description | E-value | Query Range |
Subject Range |
|
|
320.0 | [0..14] | [390..76] |
|
Region A: Residues: [1-409] |
1 11 21 31 41 51
| | | | | |
1 MLSTLFLLLY ATRETVNAMT AEISPTVSYL LDRGCANDTE IIDHLLIDRA LYYNKHKLPS 60
61 PQVDVRIEMW VQEVTSVSEL TQDFEIDLYM NEYWTDPGLA YDILNPCQGN LSFDWAVMQN 120
121 IWTPNTCFIN SKKAQLHSSP FTNVFLMVFP NGSVWSNWRI KSTGPCVMDL TKFPMDSIEC 180
181 TLTFESFNYN KDEVFMRWGD PPLTIFKPIE LPDFTMTNFS TSNKFQLYAA GYWSELNVNF 240
241 LFRRRSGWYL LQGYIPTYMT VFISWIPFYL GPKAIPARTM IGVNALLALT FQFGNIIRNL 300
301 PRVSYIKAID VWMLSGICFV FASLFELATI GFLMRNEGKP ATKSSRSTKN SNRWQQPSVC 360
361 REDTQRKSQN IVFCERLDNT SRLMFPVVFT FYNFIYWFVY MKQAWDQAP
|
| Detection Method: |  |
| Confidence: | 68.0 |
| Match: | 2bg9E |
| Description: | Refined structure of the nicotinic acetylcholine receptor at 4A resolution. |
Matching Structure (courtesy of the PDB): |
|
