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View Structure Prediction Details

Protein: CE30797
Organism: Caenorhabditis elegans
Length: 351 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE30797.

Description E-value Query
Range
Subject
Range
gi|111619247, gi... - gi|111619247|ref|ZP_01406261.1| Protein of unknown function DUF6, transmembrane [Acidovorax avenae s...
148.0 [0..46] [332..420]

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Predicted Domain #1
Region A:
Residues: [1-84]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDVKHQILD LEIDKKVKSS SSSIIQGLCS IQLLSMIAVT AHHTAMPFFV QMANTSHFLP  60
   61 TTSVFMMEVL KLLFCLIIVL FKTK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [85-182]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SFEKTGKKLY EHIWKNRVET LKVSVPAVVY AIQNNLYYIA LANIDATTYS VTVQLRILTT  60
   61 ALLSVIILNQ KLSNYQWLAQ GMALIGVVLV QIDNSNPH

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.23
Match: 2i68A
Description: No description for 2i68A was found.

Predicted Domain #3
Region A:
Residues: [183-351]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GKVFGNFWLG ITAVFGMCWT SGFAGVYFEK MLKESSADVW VQNIRLSTLT LLFAGITMLS  60
   61 TDGEAVLTGK MFFGWNWIVW FVTIGNSIVG LCISLVMKYA DNVMKTYCQS LAIGLTAIVS 120
  121 IFLGDRTLSI DLIYGVLLVT SSIVVYSRFP ATTSTKYEPL EQDSDAEKN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle