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View Structure Prediction Details

Protein: dpf-6
Organism: Caenorhabditis elegans
Length: 573 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for dpf-6.

Description E-value Query
Range
Subject
Range
dpf-6 - acylamino-acid-releasing enzyme status:Partially_confirmed UniProt:P34422 protein_id:AAM48525.1
266.0 [0..21] [573..21]

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Predicted Domain #1
Region A:
Residues: [1-573]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLFLPILILN LLIITHAIDI IPREVLFQDP KYSSVSLSPD AKQVGYVAPD ENGIRNVFTR  60
   61 CSSCSYSRQV TFETEHPILN YVWTAIPDVI LFTQDNHGDE NTRIYKKNIS ATAIAADKTQ 120
  121 RVVISEKPMV KAMILSNNLI SETVLIGMND ENPALHNIYA FNCQTDELKL VLQNRRFSIF 180
  181 FFDNDLNVRL ASEEGPDGEM IYYRPRSNEG ARTTEQNTWV EYLRIQHDDK AITMPITFDK 240
  241 SNNFMYWIMG DGSDLGNLVV FPFEDPQQKE ILYTAQRAQI GNVLIHPTDK TLLAVTEVYH 300
  301 KPELFVANET FMEDLQYLVN MKPSGSMNIV SMSIDMSTWL VTYSSSDEPY DIYLYRRWNK 360
  361 KAELFMSTRP ELKKYTLNKQ IGFDFRARDE MTIQAYLSLP PQAPLLKSSQ VPDGDRPYAN 420
  421 LGMIPAVPQK MIVLVHGGPK ARDHYGFSPM NAWLTNRGYS VLQVNFRGST GFGKRLTNAG 480
  481 NGEWGRKMHF DILDAVEFAV SKGIANRSEV AVMGGSYGGY ETLVALTFTP QTFACGVDIV 540
  541 GPSNLISLVQ AIPPYWLGFR KDLIKMVGAD ISE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 44.522879
Match: 1yr2A
Description: Structural and Mechanistic Analysis of Two Prolyl Endopeptidases: Role of Inter-Domain Dynamics in Catalysis and Specificity
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle