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View Structure Prediction Details

Protein: CE30788
Organism: Caenorhabditis elegans
Length: 469 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE30788.

Description E-value Query
Range
Subject
Range
PPM1G_BOVIN - Protein phosphatase 1G OS=Bos taurus GN=PPM1G PE=2 SV=2
294.0 [0..5] [468..30]

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Predicted Domain #1
Region A:
Residues: [1-215]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDFKNVEYFY LKNFQDAHNC VVDLHTDWHM FGVYDGHGGT EVSKFTSAKL PDFLKERKFW  60
   61 EADDVAECLQ KAFVDFDDFI RAEESMKELK DIGDEGKPKK AGGEADSEDE ADRIDTIEEA 120
  121 SVPLAELLKR YGGAGVGKSL LSAFLAKGDV SDDSEDEDED EEEAEEQDDT EEKKENEDAS 180
  181 AEVVIENAED KEEEEGSPKK KGQKRCQKSP IQSEA

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 6.45
Match: 2i0oA
Description: No description for 2i0oA was found.

Predicted Domain #2
Region A:
Residues: [216-469]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KKSKSETDAE TAPSSSSGVD GVATEEEDED DSDKEFVADE EEDDEDAEDE QSDEEMVDGS  60
   61 LAPLLLGSGG AEVPGEDSGT TACVCLVGKD KVIVANAGDS RAVLCRNGKA VDLSVDHKPE 120
  121 DEVETNRIHA AGGQIEDGRV NGGLNLSRAF GDHAYKKNQE LGLKEQMITA LPDVKIEALT 180
  181 PEDEFIVVAC DGIWNSMESQ QVVDFVRDLL AKGSSCAEVC DALCDACLAD STDGDGTGCD 240
  241 NMTVICTTFD RKSK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 54.39794
Match: 2i0oA
Description: No description for 2i0oA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle