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View Structure Prediction Details

Protein: phg-1
Organism: Caenorhabditis elegans
Length: 228 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for phg-1.

Description E-value Query
Range
Subject
Range
gi|157749081 - gi|157749081|ref|XP_001678254.1| Hypothetical protein CBG00864 [Caenorhabditis briggsae AF16]
gi|39589105, gi|... - gi|39589105|emb|CAE57837.1| Hypothetical protein CBG00864 [Caenorhabditis briggsae], gi|187038719|em...
298.0 [0..1] [226..1]

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Predicted Domain #1
Region A:
Residues: [1-228]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRVILPLVM TVTLCLAQEA SEACTKALTD CENDLECQNR LAPLMAACST NTCQPQCRSA  60
   61 VLNVYQNKLG RILLRSDATC IPGRDELRTC NFLPAESTVH CSLGKLACEG DLQCNSKFGV 120
  121 FMSECEADAA RGACTDKCKT LLNQTIETSV GSVFSNCTCT ARDDQLCTNL KDNLLGVCLK 180
  181 NTPGVTLSPS DNSITDAPGG NDLADSSVGH GFNILSAISV YLLTVLVF

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 5.57
Match: 2gh0A
Description: No description for 2gh0A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle