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View Structure Prediction Details

Protein: CE30770
Organism: Caenorhabditis elegans
Length: 454 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE30770.

Description E-value Query
Range
Subject
Range
gi|50752715 - gi|50752715|ref|XP_413724.1| PREDICTED: similar to Na+-dependent purine-selective nucleoside transpo...
453.0 [0..7] [447..644]

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Predicted Domain #1
Region A:
Residues: [1-142]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKISDVEENS TPQKENVLQR SCSLTSKSLQ NNLNIIEKFG QQIRPYFGIG SLLIFLVVYH  60
   61 GFLVAAGIHN YQKAAPLIYV TLFFWICYLL NLIVGTKTFR AVYDDVGRKL EEITEQKKFV 120
  121 PLSLKIAFIF ALLAFTIIDS IH

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [143-229]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DLTRLTGFFA YVFYILFMFV FSNNRMKINW SVVSSALIMH YCVALIILKW STGQWFFQKF  60
   61 AELIVGFLEF AQVGAKFVFG FIAGPPN

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 30.886057
Match: PF01773.11
Description: No description for PF01773.11 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [230-293]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ICDLAPVFIF TSLQTLIYFS AVVALLFYFG IIQVVLQKSQ WFMKVLIGTT PVESVNAWAC  60
   61 TFLG

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 13.004365
Match: PF07670.5
Description: No description for PF07670.5 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [294-454]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEAPLMVAP YIEKLTDSEI FAIVTSGFAC VAGTVFTAYV ALGACPIYLL TASLLSAPMS  60
   61 LAYNNLGILQ KAGKLQPKSV VIATYALCGF SNFSSMGMSI EFLGGLAPSK RSTISKLVLR 120
  121 ALCAGSIACF MNATVAGILI SSPVICQSSQ KSDTCFRIPS G

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 14.008774
Match: PF07662.4
Description: No description for PF07662.4 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle