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View Structure Prediction Details

Protein: egl-9
Organism: Caenorhabditis elegans
Length: 363 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for egl-9.

Description E-value Query
Range
Subject
Range
egl-9 - status:Confirmed UniProt:Q565A4 protein_id:CAI79248.1
284.0 [0..1] [361..1]

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Predicted Domain #1
Region A:
Residues: [1-91]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSAPNDDCE IDKGTPSTAS LFTTLMLSQP SSSTAVLQCT YCGSSCTSSQ LQTCLFCGTV  60
   61 AYCSKEHQQL DWLTHKMICK SLQTSGMVPS N

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 8.0
Match: 2oddA
Description: No description for 2oddA was found.

Predicted Domain #2
Region A:
Residues: [92-226]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LMPQAAPAVM APIPPTVSFD DPALTTSLLL SLQNNPILNQ TISNFPPTFS ITSKTEPEPS  60
   61 IPIQIPQRIS STSTVPFSSE GSAFKPYRNT HVFNSISSES MSSMCTSHEA SLEHMSSASL 120
  121 AMFPTSSTAQ SDISR

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [227-295]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LAQVLSLAGD SPASLALVTT SVPSTASTAT IPPPATTTSS ATSSGKSETI TVGKEKIIQT  60
   61 DDPDIQIIE

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [296-363]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TEGGSKPTVS RTRKRPTPSN SADPKINYKD HNKNVVYSTT LQEHQKHLQN RGLALSIHQA  60
   61 MVLRLRRN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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