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View Structure Prediction Details

Protein: CE30758
Organism: Caenorhabditis elegans
Length: 226 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE30758.

Description E-value Query
Range
Subject
Range
gi|187024437, gi... - gi|39594520|emb|CAE72098.1| Hypothetical protein CBG19189 [Caenorhabditis briggsae], gi|187024437|em...
gi|157764432 - gi|157764432|ref|XP_001674559.1| Hypothetical protein CBG19189 [Caenorhabditis briggsae AF16]
392.0 [0..1] [226..1]

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Predicted Domain #1
Region A:
Residues: [1-226]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSIVVGSGV LAETVVGLLC AAGRRVSLVA PSGKVNALKF DSSVIKAILQ EDSEKKIPFE  60
   61 FIDDIRQQQK LADKNFKKIN VTTDISKIEA ADQIIDACSA DESSLFINTA KAVPNATIIS 120
  121 LNGEKSPIHS NHVSVKMYSP IHETKTAKMF TNSKVSKKTL EEVNQLLDSM GLTVLSEEDS 180
  181 RVADRLVLDM QQVEKSSSLS KLISTLVTPL NAPATPSMPK EQYLLF

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.2
Match: 1zcjA
Description: Crystal structure of 3-hydroxyacyl-CoA dehydrogenase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle