| Protein: | tbc-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 641 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for tbc-1.
| Description | E-value | Query Range |
Subject Range |
|
|
533.0 | [0..12] | [632..18] |
|
Region A: Residues: [1-289] |
1 11 21 31 41 51
| | | | | |
1 MGETGPTNNT SFSSLDDNWE TDVNVLSSEL GDLDTEGNDK SDWMRLLGVS MKPNPLDDWD 60
61 QLYNLNNQCA LRNDCRKLAN GLKNKRSVPE LESFLTLYCK KRGMDYIKDI GWLTILEKIL 120
121 LLNVPAAHEF NVFFAFTTKY IPKDTRPDAQ IFDLFRLLLQ YHDPQISNHL ESLHCSPSMY 180
181 TKNWFATLFS SSMSTESCHE LWKLYIEQGD PFLVFHLAIV FLINAKDEIL QVKRDEKEKA 240
241 VQILENMAAQ LSVEDVPDFF QLALHYSDKT PECIRKDFHY IIFGANFDE
|
| Detection Method: |  |
| Confidence: | 43.69897 |
| Match: | 2qfzA |
| Description: | No description for 2qfzA was found. |
|
Region A: Residues: [290-441] |
1 11 21 31 41 51
| | | | | |
1 EVKEIQMNKM LCLPIPAIDL TSHDEISSGS VNFFIVDTRS NTDFDSGHFV SSFNLDCVAI 60
61 VDEPEKFEIA LNSLECYKTS RRDEDHYLIL GYGSDEEDNY MNMLIAMFIQ KGKLHVSFVQ 120
121 GGYKKLHDCI GQHNRWELIA MHSEDRCELC SS
|
| Detection Method: | |
| Confidence: | 2.67 |
| Match: | 1hzmA |
| Description: | Erk2 binding domain of Mapk phosphatase mkp-3 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.708103811735445 | bayes_pls_golite062009 |
| protein binding | 0.279521784602446 | bayes_pls_golite062009 |
|
Region A: Residues: [442-528] |
1 11 21 31 41 51
| | | | | |
1 EKASPKWGFF SKMKSAVSNT SSRMKERVEA VVFPIGEEKK LDDKHADSKQ RHGKRYRQQS 60
61 VFTIDENSDD EMAAGAAVDE NPKEEIL
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [529-641] |
1 11 21 31 41 51
| | | | | |
1 LSKEFTETFE CQEVFRDGSI NGHIALTRTH IYVLHDVPGK QGYVTTEARH ALSTVVAVTS 60
61 RRSVPEMLTF KLGYEMNGSS KITAVHKLYV PKAGECAKAV KLAIYALRPL PDA
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
