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View Structure Prediction Details

Protein: CE31483
Organism: Caenorhabditis elegans
Length: 540 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE31483.

Description E-value Query
Range
Subject
Range
CE40385 - status:Partially_confirmed UniProt:Q0G826 protein_id:CAL36496.1
378.0 [0..65] [540..1]

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Predicted Domain #1
Region A:
Residues: [1-351]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSSAAMARS NGDKPSTSSM EEDLEIEQSM RNASIIDHQY EKEENKNHRV LNAFDPADKT  60
   61 TFSDMIHVDV PDTKTLVERS DGITKYTAYN IHINGWYHGS VRFSHLYEFA ELIKQKFSQR 120
  121 YKGPEFPAKK LFKLDPKAID ERRQKITKYF QALVQHPEVA RHYLVEKKLL GFQIDSFRAT 180
  181 SQYVTLDVFL GNGEKTTIKC LVSDSTLEIM KIICEKLGFK NKDQFIYHFG LFMAKGRDPT 240
  241 NACYSVTTEN FNPLLTRFLR NFEAPFVSLS TANQKYNENG HYHFLCLRKL IWDSRVEEPL 300
  301 LDDGNFVELL YKQAMQDYKN GHMDPVKEDL DSKLKSCMAR NDSKMFLRTC H

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 34.522879
Match: 2dybA
Description: No description for 2dybA was found.

Predicted Domain #2
Region A:
Residues: [352-460]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QLSTYSYEIM SPCSCDYPKP GTPCEIKFGR RQIIMTTRDE TGKPKPSIFR ATRIRVWRIT  60
   61 QVMDKISFQF EYLMAKDTFE WITLDTDQSI LMSLLLQSIG SEILYEHNN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 23.69897
Match: 1y19B
Description: Structural basis for phosphatidylinositol phosphate kinase type I-gamma binding to talin at focal adhesions
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [461-540]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTIEQQVMKE KHSKGNYVEK SEKLPRDPKK PIIVLKNEVE DTDPLGVMEH YHNYNRMLTT  60
   61 ISDGIPQRNQ AFTDITNDDL 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle