| Protein: | git-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 670 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for git-1.
| Description | E-value | Query Range |
Subject Range |
|
|
607.0 | [0..5] | [668..52] |
|
Region A: Residues: [1-485] |
1 11 21 31 41 51
| | | | | |
1 MYTAEALDLI TSLEQKECDD CGKKEVEWAS VKKGTVICSE CFCFHSYLGP SVSYLRHLRK 60
61 SAWDEEHIRL VHALNTSNTN MIWESALYEG STKFQKPMAQ DPSHIKEQFV KEKYEKLTFQ 120
121 PKRGKDEDLE NSLNRQLIAC ARSDFAHVTL RLIALGADVN YPDPETGDTA LHVAAREGNS 180
181 NQVELLFLYG ADIMAPNREG MLPYILARDA GHGQLSHRIY EFFFYVFDRF SFFMCNRKAD 240
241 HKNNQDFFIP EVTEKQFLTK TNDSRAAISV LPKGQFFDLC EDAFDETVRR ENEVNWNMTK 300
301 WAKTAKGPTN LFLPPTPQMS AARNQRRQKL AKFTPIQFTI LLIDLIKDQK RRITGDNPAP 360
361 VSEPPKNMRK SNDTPLRIMK KSEYADYDEV AGISCSPISG IVPNSQANTL DESSSRVWDE 420
421 LLEMKERLSS TETMVVTLTK QNEELTKLVH SLQAQNINLN SELITFRDDL YNLKRTNMTR 480
481 RMPSP
|
| Detection Method: |  |
| Confidence: | 75.39794 |
| Match: | 1n11A |
| Description: | Ankyrin-R |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [486-670] |
1 11 21 31 41 51
| | | | | |
1 LAIVETPERV MPPVGIQQGF SRRDSEDRID GGGARWRSNS SDRRNSNDHK LDKKVERRQD 60
61 SMMESSSSLS RSSQNPSCLN REEVKTRVIQ QSEKITRHIK TLLQHGHNGN LDMNARGGAH 120
121 DIACAINSLI TILLPYVRHE KIDTLTDAVV LLNAKCNSPV LMPMDIVDAA QTIAEKLRLI 180
181 IMEFC
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
