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View Structure Prediction Details

Protein: CE31474
Organism: Caenorhabditis elegans
Length: 195 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE31474.

Description E-value Query
Range
Subject
Range
gi|62531122, gi|... - gi|71895817|ref|NP_001025675.1| tpd52l2 protein [Xenopus (Silurana) tropicalis], gi|62531122|gb|AAH9...
199.0 [0..15] [187..1]

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Predicted Domain #1
Region A:
Residues: [1-195]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPKGNKKPNE KKEELEKFAK ELQGSDSDED AVVIEQPTVE PKLPQNDSSS SNKIVLSQAE  60
   61 KDLLRTELDK TEEEISTLKQ VLSARQKHAA ELKRKLGLTP FSELSQDINR SLKTVTDTDA 120
  121 YQKTAEVAAA TSDTVKEKWN DMRNSSLFKS FESKLGSALN NAKMAASTSI DHLAGAARGP 180
  181 SQTGTPVAEE AKPIS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 4.30103
Match: 1bg1A
Description: STAT3b
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle