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View Structure Prediction Details

Protein: CE30749
Organism: Caenorhabditis elegans
Length: 313 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE30749.

Description E-value Query
Range
Subject
Range
gi|40555721 - gi|40555721|gb|AAH64668.1| Nubp1 protein [Danio rerio]
309.0 [0..3] [308..1]

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Predicted Domain #1
Region A:
Residues: [1-313]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDVPDDANA GCPGTGSAGA GKASGCAGCP NQGSCATGQG PPPDADVPKI QDRFSRIKHK  60
   61 ILILSGKGGV GKSTLTSNLA RALASDPSKQ VAILDVDICG PSQPRMMGVE DEEVHNSADG 120
  121 WTPVGIQPNL TLMSIAFLLG DKNDAVIWRG ARKNGMIKQF LKDVDWGEVD YLLIDTPPGT 180
  181 SDEHISLVQF LLQAGPLDGA LIVSTPQEVS LLDVRKEVSF CVKTKVPILG VVENMARFVC 240
  241 PNCAHTTLLF PTSTGGAEQM CKDSNLELLA QLPLEPALAK ALDNGEDFFE TNPDSTLAKS 300
  301 FLDLAEKVKA KLV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 46.154902
Match: 2ph1A
Description: No description for 2ph1A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle