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View Structure Prediction Details

Protein: drs-2
Organism: Caenorhabditis elegans
Length: 593 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for drs-2.

Description E-value Query
Range
Subject
Range
SYDND_AROAE - Aspartate--tRNA(Asp/Asn) ligase OS=Aromatoleum aromaticum (strain EbN1) GN=aspS PE=3 SV=1
583.0 [0..23] [592..1]

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Predicted Domain #1
Region A:
Residues: [1-593]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MISARNVTAI CCRRILSTSS YTVRTHICDE LSTSNKNEKV SVMGWLSHKR MDRFFVLRDA  60
   61 YGSVQAKISA SSKLQSLLKD IPYESVVRVD GIVVDRGDNR NSKMKTGDIE IDVEELTVLN 120
  121 KATSNIPMLP DANANERTRL KYRYIDLRSD KLQKSLRLRS EFVHNVRRFL VEKSGFVDVE 180
  181 TPTLFRRTPG GAAEFVVPAP SPNQGLAYSL PQSPQQFKQL LMVGAIDRYF QIARCYRDEG 240
  241 SKGDRQPEFT QVDVEMSFTT QNGVMQLIED MIISAWPESL NHIKPKSPFP RIPYSDAMRL 300
  301 YGIDKPDMRI PWQIDDVDND IFEFLQKDID DDTWRSRILV CRGAGKTTIS NSMKNEWKRL 360
  361 IQMNENGKNF AICHPSQKRW FKPFDNQKLI DQFGLIDEDV LIVCWGNSEG VYWTLEVCGL 420
  421 RSKSNVTAHW IVDFPLFSFE EGQLVSTHHP FTAPLEKDID ILYSNDIDKL LQITGQHYDL 480
  481 VINGVEMGGG SIRIENSEIQ RHVLKVLGEP TDEMEHLLNA LSHGAPPHGG FALGLDRFVA 540
  541 MLTSDGNPLT PVRDVIAFPK TKNGKDLMSD APATLSQKQL ERYGISLLPN AVE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 160.0
Match: 1eqrA
Description: Aspartyl-tRNA synthetase (AspRS); Prokaryotic AspRS, insert domain
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
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