YRC Public Data Repository - Protein Structure Prediction

Protein:	unc-98
Organism:	Caenorhabditis elegans
Length:	310 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for unc-98.

Description	E-value	Query Range	Subject Range
gi\|73947291 - gi\|73947291\|ref\|XP_541354.2\| PREDICTED: similar to Zinc finger protein 606 (Zinc finger protein 328)...	488.0	[0..3]	[309..2517]
gi\|76642592 - gi\|76642592\|ref\|XP_599815.2\| PREDICTED: similar to zinc finger protein 329 [Bos taurus]	448.0	[0..2]	[308..605]
gi\|114626840 - gi\|114626840\|ref\|XP_528435.2\| PREDICTED: zinc finger protein 79 (pT7) [Pan troglodytes]	446.0	[0..6]	[306..390]
gi\|68373903 - gi\|68373903\|ref\|XP_689557.1\| PREDICTED: similar to zinc finger protein 135 (clone pHZ-17) [Danio rer...	433.0	[0..6]	[308..1262]
gi\|2224593 - gi\|2224593\|dbj\|BAA20784.1\| KIAA0326 [Homo sapiens]	430.0	[0..3]	[309..205]

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Predicted Domain #1

Region A:
Residues: [1-191]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDDDIFKEAR KERDDFEELM NACDLAKMSV KNNEMVHGLE TFGINGESSE NGNKEKPKEI  60
   61 MKVVAPTVEA YVGSSSAQTP TKSSGGALDG SDQQEVRQDG TSVQKDDNGF VFYKCRFCGL 120
  121 TFNFMNTLRA HERIHDVSQP YVCGKCGDSF EFACQLEYHA AQHSEIDGYK CECGRTFFSY 180
  181 TEMLYHKHTD D

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	54.39794
Match:	2i13A
Description:	No description for 2i13A was found.

Predicted Domain #2

Region A:
Residues: [192-310]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PLELIGAPET TTIKVSKKRV LPVSEQDLPQ PAFVTEGYEP KHPLRVYNDV RSKPYICEYC  60
   61 SKSYSDSRGL AYHMYSHRGE KYFNPRASRY MMGREGVGYT DSRSYYLFPR TSGYVTPRF

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	15.09691
Match:	2dlqA
Description:	No description for 2dlqA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits