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View Structure Prediction Details

Protein: mec-5
Organism: Caenorhabditis elegans
Length: 327 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for mec-5.

Description E-value Query
Range
Subject
Range
gi|113461768, gi... - gi|113461768|ref|YP_719837.1| large adhesin [Haemophilus somnus 129PT], gi|112823811|gb|ABI25900.1| ...
358.0 [0..4] [327..1402]

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Predicted Domain #1
Region A:
Residues: [1-327]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLLILLLLT ISSIYCALDT AAVIAIQTEI NKHSADIEMI LDHVKNLNAR VSDLGRPGPP  60
   61 GTNGSPGFPG SKGEKGDRSE DGMSGRDGMQ GIPGVKGDMG PLGPTGMKGD KGSMGFPGQK 120
  121 GEGGNSGIPG LKGDTGIPGK VGEPGSTGQP GSKGEKGMEG LPGTNGLPGA PGWPGSKGED 180
  181 GLPGRPGSPG FPGKKGDVGN GGVPGVPGMI GERGLPGAPG AQGMMGPIGP PGQLGLPGPK 240
  241 GDLGSAGLPG SKGEMGKDGI PGLPGWIVND KGYCILALGN CPPAFTQIGA YQAHVDNYRF 300
  301 GDYSLVKSSG IGGNEEQFAL KVHACCR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 45.045757
Match: 1y0fB
Description: No description for 1y0fB was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle