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View Structure Prediction Details

Protein: acs-17
Organism: Caenorhabditis elegans
Length: 718 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for acs-17.

Description E-value Query
Range
Subject
Range
gi|187028138, gi... - gi|39598132|emb|CAE68824.1| Hypothetical protein CBG14783 [Caenorhabditis briggsae], gi|187028138|em...
gi|157769963 - gi|157769963|ref|XP_001676802.1| Hypothetical protein CBG14783 [Caenorhabditis briggsae AF16]
563.0 [0..1] [718..1]

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Predicted Domain #1
Region A:
Residues: [1-718]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVDESDVKSA LNGHDRPFTI TLAIVLLKIV FFIYDVVTFI PFKIFADPAE KLEKSERVKA  60
   61 EPDNGDPTTP WKNVSAKDGL MNSSFEGIHD LGTQWEECVR RYGNQPCMGT REVLKVHKEK 120
  121 QSNGKIFEKW QMGDYHWRSY AQVDKRVNMI ASGLTSLGQQ EKEPIILFAE TREEWMTTAL 180
  181 ACMKMNFPIA TMYATLGDEA VQFAINEVGA KTIFTSEALI SKVKKAMSNG ATSIENIIFF 240
  241 DSVDPASRGE SVDVDLPFTL LSFDQLLSRG EPYPVPTRSK KDDLAFIMYT SGTTGNPKGV 300
  301 MISHQNIVAV TAGQAFNIVL GPDDRYIGYL PLAHILEVCA EMVVFTKGVR IGYSSAQTLF 360
  361 DRAPKIMKGE HGDCWVLQPT LMACVPAVMD RIFKAVIDEV NANSELFKQL FKTCYERKRS 420
  421 RYEEGYTSFI LNKLVFNRIG KLLGGKVRQI LSGGAPLSPE TQRFMNICFC CPVVQGYGLT 480
  481 ETCGGGTIAD IHDLSTGTVG PPLTCCEILL QEWAEAGYSP KNDPPQGEIL ISGPNVALGY 540
  541 FKNDEKTKEE FVKVNGKTFF ATGDIGEFRE DGSLKIIDRK KDLLKLAHGE YISLGKVETN 600
  601 LLTNPNVDNV CVYGDSNKSF LVALVVPNQK NLTQLASKAG ASNDNFEKLC EDKKVVEALQ 660
  661 KELAQYGASK LQRVEIPQKI FICHEPWTPA SGLLTEALKL KRKNIEKAFR KELDELYK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 147.0
Match: 2p2bA
Description: No description for 2p2bA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle