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View Structure Prediction Details

Protein: elt-4
Organism: Caenorhabditis elegans
Length: 72 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for elt-4.

Description E-value Query
Range
Subject
Range
gi|46100068, gi|... - gi|71020337|ref|XP_760399.1| hypothetical protein UM04252.1 [Ustilago maydis 521], ref|XP_401867.1| ...
106.0 [0..1] [68..1582]

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Predicted Domain #1
Region A:
Residues: [1-72]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDNNYLDASH RKRLVCSNCN GTNTTLWRRK AEGDPVCNAC GLYFKLHHVT RPIPMKKNKK  60
   61 HAVLPAPGIS KL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 15.221849
Match: 4gatA
Description: Erythroid transcription factor GATA-1
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.270879137859077 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle