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View Structure Prediction Details

Protein: tag-253
Organism: Caenorhabditis elegans
Length: 350 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for tag-253.

Description E-value Query
Range
Subject
Range
gi|157760639 - gi|157760639|ref|XP_001672662.1| Hypothetical protein CBG20564 [Caenorhabditis briggsae AF16]
gi|187023288, gi... - gi|39581090|emb|CAE73168.1| Hypothetical protein CBG20564 [Caenorhabditis briggsae], gi|187023288|em...
342.0 [0..15] [349..56]

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Predicted Domain #1
Region A:
Residues: [1-350]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTWRASLGN TILVFCLKVF QNSRALFLRT FGLPFARYLN FILPSEFKMS LNGFGEHTRS  60
   61 ASHAGSWYNA NQRDLDRQLT KWLDNAGPRI GTARALISPH AGYSYCGETA AYAFKQVVSS 120
  121 AVERVFILGP SHVVALNGCA ITTCSKYRTP LGDLIVDHKI NEELRATRHF DLMDRRDEES 180
  181 EHSIEMQLPF IAKVMGSKRY TIVPVLVGSL PGSRQQTYGN IFAHYMEDPR NLFVISSDFC 240
  241 HWGERFSFSP YDRHSSIPIY EQITNMDKQG MSAIETLNPA AFNDYLKKTQ NTICGRNPIL 300
  301 IMLQAAEHFR ISNNHTHEFR FLHYTQSNKV RSSVDSSVSY ASGVLFVHPN 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 35.154902
Match: 2pw6A
Description: No description for 2pw6A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle