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View Structure Prediction Details

Protein: tre-5
Organism: Caenorhabditis elegans
Length: 674 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for tre-5.

Description E-value Query
Range
Subject
Range
gi|157754036 - gi|157754036|ref|XP_001680730.1| Hypothetical protein CBG07000 [Caenorhabditis briggsae AF16]
gi|39586886, gi|... - gi|39586886|emb|CAE62821.1| Hypothetical protein CBG07000 [Caenorhabditis briggsae], gi|187033710|em...
544.0 [0..1] [674..1]

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Predicted Domain #1
Region A:
Residues: [1-674]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRETLLAILL IVYVSARPQK DPRGPNIIDD NADFGTPEHD NRVHTELTQL TDKEVAQLIG  60
   61 SDYFNGSVLP CDNETAPGQW MIYCSGKLLQ TVMAVQLYPD SKTFVDQPMK ENQTGKSIME 120
  121 HFEKRFPVSI EKITKKDVAE FVDEFFDKEG NELDVCDLPD WRPITEQLAN IKDASYQAFA 180
  181 QRLHFIWIQL CRQIKPEVKN DPSRFSLIYV PYQFILPGGR FREFYYWDAY WILKGLIASE 240
  241 LYSTARMMIL NFAHIIETYG FVPNGGRVYY LRRSQPPFFA PMVYEYYLAT QDIQLVADLI 300
  301 PVIEKEYTFW SERRTVNVTY EHPDLNETLH MFQYRTEAET PRPESFREDV LSAEHFTTKD 360
  361 RKKQFFKDLG SAAESGWDFS SRWFKNHKDI STIETTNIVP VDLNAFLCYN MNIMQLFYKL 420
  421 TGNPLKHLEW SSRFTNFREA FTKVFYVPAR KGWYDYNLRT LTHNTDFFAS NAVPLFSQCY 480
  481 DPLNSQIAVD VYNEMQNSGA FSIPGGIPTS MNEETNQQWD FPNGWSPMNH MIIEGLRKSN 540
  541 NPILQQKAFT LAEKWLETNM QTFNVSDEMW EKYNVKEPLG KLATGGEYEV QAGFGWTNGA 600
  601 ALDLIFTYSD RLQYNGPILE SLVGSQTTSM KSSPDSSTSL PIDITTTITT SSSSSTFGYS 660
  661 NILTLITVFV LYIL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 97.69897
Match: 2jf4A
Description: No description for 2jf4A was found.

Predicted functions:

Term Confidence Notes
trehalase activity 8.21995956919006 bayes_pls_golite062009
alpha,alpha-trehalase activity 8.15034892377685 bayes_pls_golite062009
hydrolase activity, hydrolyzing O-glycosyl compounds 2.91663376644963 bayes_pls_golite062009
hydrolase activity 1.70627242352696 bayes_pls_golite062009
hydrolase activity, acting on glycosyl bonds 1.61226907827219 bayes_pls_golite062009
catalytic activity 1.16285856935495 bayes_pls_golite062009
binding 0.614457867010069 bayes_pls_golite062009
protein binding 0.31260719357226 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle