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View Structure Prediction Details

Protein: inx-18
Organism: Caenorhabditis elegans
Length: 412 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for inx-18.

Description E-value Query
Range
Subject
Range
inx-18 - status:Partially_confirmed UniProt:Q8MXG9 protein_id:AAM81118.1
463.0 [0..1] [409..1]

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Predicted Domain #1
Region A:
Residues: [1-130]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVGGFRIGMH FLASALRFLE PRVDDDFVDR LHYLYTSTMV LMFAVLVSAK QYVGHPIECF  60
   61 VPAQFTRAME QYTENYCWVQ NTYWVPFQDL IPHRLDDRER RQIGYYQWVP FVLAVAALTF 120
  121 HIPSSVWRML 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [131-195]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AGQSGLNAGL VLQLVCGDEN VDPVVRDKTV DIVARHIDDA LMYQRDHGAR RHSVYIFAIF  60
   61 KLGKF

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [196-281]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YGAYVSSVYI FIKALHLANV ILQFMLLNSF LQTSDYPMFG AHVLYDLFMG REWRDSGKFP  60
   61 RVTLCDFEIR VLGNVHRHTV QCVLVI

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [282-412]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NMLTEKIFIF LWLWLTVLAI VTALNLIFWF IALVSNSCRE HFVSKHLDIQ SDQISRFVHR  60
   61 FLRADGVFLL QMIASHSGNL MAAKVTEQLW MIFVRRSGKP VIEDKIEDRG SVRSTNGNDW 120
  121 ESVGELSIVD C

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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