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View Structure Prediction Details

Protein: inx-18
Organism: Caenorhabditis elegans
Length: 436 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for inx-18.

Description E-value Query
Range
Subject
Range
inx-18 - status:Partially_confirmed UniProt:Q8MXG8 protein_id:AAM81119.1
476.0 [0..1] [412..1]

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Predicted Domain #1
Region A:
Residues: [1-130]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVGGFRIGMH FLASALRFLE PRVDDDFVDR LHYLYTSTMV LMFAVLVSAK QYVGHPIECF  60
   61 VPAQFTRAME QYTENYCWVQ NTYWVPFQDL IPHRLDDRER RQIGYYQWVP FVLAVAALTF 120
  121 HIPSSVWRML 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [131-195]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AGQSGLNAGL VLQLVCGDEN VDPVVRDKTV DIVARHIDDA LMYQRDHGAR RHSVYIFAIF  60
   61 KLGKF

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [196-345]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YGAYVSSVYI FIKALHLANV ILQFMLLNSF LQTSDYPMFG AHVLYDLFMG REWRDSGKFP  60
   61 RVTLCDFEIR VLGNVHRHTV QCVLVINMLT EKIFIFLWLW LTVLAIVTAL NLIFWFIALV 120
  121 SNSCREHFVS KHLDIQSDQI SRFVHRFLRA 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [346-436]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DGVFLLQMIA SHSGNLMAAK VTEQLWMIFV RRSGKPVIED KIEDRGSVRS TNGNDWESHD  60
   61 DGKTSLKRGD SWHETSLPPP MPSLPTRTHY V

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle