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View Structure Prediction Details

Protein: inx-1
Organism: Caenorhabditis elegans
Length: 383 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for inx-1.

Description E-value Query
Range
Subject
Range
inx-1 - status:Confirmed UniProt:Q17394 protein_id:AAN71842.1
456.0 [0..1] [379..1]

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Predicted Domain #1
Region A:
Residues: [1-124]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLYYLAAIF KGLHPRVDDD FVDKLNYHYT SAIIFAFAII VSAKQYVGYP IQCWVPAQFT  60
   61 DAWEQYTENY CWVENTYYLP LTSAFPLEYG DRRARQISYY QWVPFVLALE ALCFYIPCIM 120
  121 WRGL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [125-240]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LHWHSGINVQ SLTQMACDAR MMDADARAAT VQTIAGHMED ALEIQREVTD VSGMCVQKRW  60
   61 ANYVTLLYVF IKMLYLGNVV LQVFMLNSFL GTDNLFYGFH ILRDLLNGRE WEVSGN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [241-383]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FPRVTMCDFE VRVLGNVHHH TVQCVLMINM FNEKIFLFLW FWYFMVAFVS AVSMFHWIII  60
   61 SFLPGQHMKF IRKYLRATDL ATDRQSVKKF VHKFLGYDGV FCMRMISAHA GDILATELIV 120
  121 ALWHNFNDRV RKIQFNSTES LNH

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle