| Protein: | CE31879 |
| Organism: | Caenorhabditis elegans |
| Length: | 756 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE31879.
| Description | E-value | Query Range |
Subject Range |
|
|
507.0 | [0..1] | [584..309] |
|
Region A: Residues: [1-510] |
1 11 21 31 41 51
| | | | | |
1 MQHVDQIYGY STIILAAAPL ASQLAISDIR WIFYFPFFAI PALTLMMIVG HLSKSAAVST 60
61 FRKLAPISAG IGWALTWHVA EKLYAESLRA SQYVLYILFS IRPYLSWAVS CDHTYNTEYC 120
121 HDFDDSNITV TEGKHHYPDN FWPAQEFNRY VIRNNAPITK MPAEWEPNMW YLGPSDETFT 180
181 WAFPSIPLQT AHILTWLIIW FSISKYYDRL GDILLKGFLL VPIILYIAVI IGLTGFGFHF 240
241 TTANIQAELE NSAISKDPFD FWADLRGSYR TSILIVDYST AFTGFVLLAT SRLRNGVSGL 300
301 NALLLVPFMM IVPTMQTLIR LGCEGHVADQ QPNYKIYAST DETISFDLLP VCFATSHLGP 360
361 VWSGLYYTAQ YLYGSLGPMI VYVSFIYQSF IDDFPIVQNS PKQCIGMIVL AFLMPSVFLY 420
421 MPLGTKIAAF FRYTSQTALV QLTVFILIFF VYGWQKLEQD VMMTSQIPAR PSVLEYFTRA 480
481 TSPIFTVLLF TVVPALICTK LVAVFDFLWA
|
| Detection Method: |  |
| Confidence: | 50.69897 |
| Match: | 2a65A |
| Description: | Crystal structure of LEUTAA, a bacterial homolog of Na+/Cl--dependent neurotransmitter transporters |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [511-756] |
1 11 21 31 41 51
| | | | | |
1 GNDVNKHISA GVQFLPFPTV IRQIVGYLVI FAPIIIMGVG AALTVYQMVF KHGLSWKDTL 60
61 KPSPEWMAHA AVNPNKPRAH SLAYSIMNRL IFRRMSYKTA IFSLFLFETF IGILLVVFFF 120
121 LNSSNLWVSS TRVANQYRSV LLLIFVVCHI WTLFEMRKCQ QYSQIEGERL SFYIGLATME 180
181 TAMLNAYMWM YAGDHTGGID VPPLLIIMCN TCKLLIFLLE KIRRSEIPFM IFFQILSLNK 240
241 DQNIKY
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
