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View Structure Prediction Details

Protein: pdi-2
Organism: Caenorhabditis elegans
Length: 437 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for pdi-2.

Description E-value Query
Range
Subject
Range
gi|86161652 - gi|86161652|gb|ABC86956.1| protein disulfide isomerase [Teladorsagia circumcincta]
336.0 [0..1] [437..1]

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Predicted Domain #1
Region A:
Residues: [1-437]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFRLVGLFFL VLGASAAVIE EEENVIVLTK DNFDEVINGN EFILVEFYAP WCGHCKSLAP  60
   61 EYAKAATQLK EEGSDIKLGK LDATVHGEVS SKFEVRGYPT LKLFRNGKPQ EYNGGRDHDS 120
  121 IIAWLKKKTG PVAKPLADAD AVKELQESAD VVVIGYFKDT TSDDAKTWIQ ANRLALVSEF 180
  181 TQETASVIFG GEIKSHNLLF VSKESSEFAK LEQEFKNAAK QFKGKVLFVY INTDVEENAR 240
  241 IMEFFGLKKD ELPAIRLISL EEDMTKFKPD FEEITTENIS KFTQNYLDGS VKPHLMSEDI 300
  301 PEDWDKNPVK ILVGKNFEQV ARDNTKNVLV EFYAPWCGHC KQLAPTWDKL GEKFADDESI 360
  361 VIAKMDSTLN EVEDVKIQSF PTIKFFPAGS NKVVDYTGDR TIEGFTKFLE TNGKEGAGAS 420
  421 EEEKAEEEAD EEGHTEL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 58.0
Match: 2b5eA
Description: Crystal Structure of Yeast Protein Disulfide Isomerase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle