YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CE30721
Organism: Caenorhabditis elegans
Length: 609 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE30721.

Description E-value Query
Range
Subject
Range
CE35776 - status:Partially_confirmed UniProt:P91472 protein_id:AAB37594.2
682.0 [0..1] [608..1]

Back

Predicted Domain #1
Region A:
Residues: [1-225]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSQNPTNAK YSTLSLGEPI RLPPSHPGKI IAKITTAFIG VLVVSATILV ALSGTTPSSH  60
   61 LAAPSHKALA TQEEPIHLEN DSQNRYVEFQ YDPISGKYSH VNKNGSRINP FVVKNVERHS 120
  121 EKPYDAYLHK KDKNEEGSIY WKFNLKSTEK ILEKLEIRMV SINNIADGGG KAEACLQPSE 180
  181 VCKDIPVGGV LIFEKPESET LTVGIKLFKD IQLFGRDEKC TECGK

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 6.11
Match: 2g9gA
Description: No description for 2g9gA was found.

Predicted Domain #2
Region A:
Residues: [226-412]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FERGFTVKAF WKSLYLAEKI TTQNKLIQFN PNSGDNYVKF TYSILNNTYS HDNIDGSPVA  60
   61 PYFVDKIERL VDRTNNEVYL RQEFPGVFSN MYWAFNLTND GKLVEKVVIS IPGIEELTNN 120
  121 RAGVVEACEN IHEDCNIFLE NETLTIMQQM DTLYISITLW KDISVLKTKL KGVSNVESFK 180
  181 IEVYWTT

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 41.30103
Match: 2g9gA
Description: No description for 2g9gA was found.

Predicted Domain #3
Region A:
Residues: [413-609]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TTPGSIVTTK SSTTPITEPD HQPDISTTPL TESYEIIQLK PETGRDYAKF TYDVISNTYS  60
   61 QSYEDGSPVK PYLASNVEHV VDRRLNVAYI HMKEPINKRI GLINWEFDFN SPGRTVEKLD 120
  121 IKLAGMDEIV NNGGTANACQ HVFKCTAIPT NGSLTIEKPQ FNKFFMRIEL FKNIKVFKTE 180
  181 LNDRSSVESI SIVVYWS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 35.69897
Match: 2i74A
Description: No description for 2i74A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle