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View Structure Prediction Details

Protein: ugtp-1
Organism: Caenorhabditis elegans
Length: 355 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ugtp-1.

Description E-value Query
Range
Subject
Range
gi|187033859, gi... - gi|39585109|emb|CAE62760.1| Hypothetical protein CBG06926 [Caenorhabditis briggsae], gi|187033859|em...
gi|157776057 - gi|157776057|ref|XP_001666094.1| hypothetical protein CBG06926 [Caenorhabditis briggsae AF16]
154.0 [0..1] [351..1]

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Predicted Domain #1
Region A:
Residues: [1-120]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFQNVHISH QDEDKEKLLP NDKDVEKADE SPSSSRPSFV FKCYVIASMT FIWTAYTLTI  60
   61 KYTRSTVNPD MMYSSTSVVL CAEILKLVIT FAMFYKECNF DSRQFSEQVS KYYINAPREL 120
  121 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [121-199]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AKMSVPSFAY ALQNNLDFVG LSNLDAGLYQ VTTQLKVVST AFFMMLFLGR KFSTRRWMAI  60
   61 TLLMFGVAFV QMNNVSASE

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.21
Match: 2i68A
Description: No description for 2i68A was found.

Predicted Domain #3
Region A:
Residues: [200-355]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ANTKRETAEN YIVGLSAVLA TCVTAGFAGV YFEKMLKDGG STPFWIRNMQ MYSCGVISAS  60
   61 IACLTDFSRI SDKGFFFGYT DKVWAVVILL GVGGLYISLV MRYLDNLYKS MASAVSIILV 120
  121 VVLSMLIFPD IFIGMYFVLG TICVVLAVLL YNSVNE

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle