YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gur-3
Organism: Caenorhabditis elegans
Length: 447 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gur-3.

Description E-value Query
Range
Subject
Range
gi|14587177 - gi|14587177|gb|AAK70489.1|AF387606_1 putative chemoreceptor GUR-3 [Caenorhabditis elegans]
220.0 [0..1] [447..1]

Back

Predicted Domain #1
Region A:
Residues: [1-252]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTITASNTLE FKWTSPRSSR SSFRTTTDAE QKISIDMSNT YCDQVLGPLY SYMMVLGLNH  60
   61 THSSARNTMF KWPLTIYNYL TLAILTAATI RRISQIKQKS ATNEEKDAAF HVLNPTFVLT 120
  121 LCHALLMFSG LAAGFLLLKL QKQREKMYHV LDQGLGRNRN EEHDSHHFKL NKLFISISFS 180
  181 FAAALSFVQI ATKMRYLDLP DTPDLINRKI YFVILEGYVI FIASSCISLV AILFFQLCRI 240
  241 LQFSIGQLIE EM

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [253-447]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VPKEKEECPL PEQSLQQIHD VQIHYQEISN AKLYIEQNFS FSLFYTYGCC IPLTCLLGYI  60
   61 AFRNGIQADM AETFSVAIWL TNTMLALMLF SIPAFMIAEE GDKLLTASFK MYHETLCEER 120
  121 DLLVLSQMSF LSFQMHATKL TLTAGNFFMM NRKIMISLFS AIFTYFLILV QFDAEKERAG 180
  181 ECNNQSRVLI VQPPV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle