| Protein: | CE29886 |
| Organism: | Caenorhabditis elegans |
| Length: | 521 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE29886.
| Description | E-value | Query Range |
Subject Range |
|
|
353.0 | [0..45] | [520..14] |
|
Region A: Residues: [1-521] |
1 11 21 31 41 51
| | | | | |
1 MIQQIASGST SMAACERENS VDNQPDRASI DDRSSNKNYD EDVESRMIPV DRPSHKGSIR 60
61 DNTPDSILRL NIGGSSYRIR TRSIIKFGPK TLLGRFVRMN HEHRRQWADW YFEEQDEYFF 120
121 ERVPRYFDPI YDFYATGKLH VPKDLCFDKF MAELRFWAVS KSRMDECCSP FTQYCVTMGG 180
181 DPKCTEKDHF IGVRCANIRR RLWLILEGHS QSKWWKAFEI ISTAFVVLSI SALILGSIPE 240
241 FQVPQKSEDG QLVYATATYP TYPNGGGMTI ESRTVVREGS DNSTGDLMAE ETVPTPRNTG 300
301 KIEMTEHPVF TWVENVCVIY FSIEYAMRFI VAPRKLAFAR QILNVIDLLS IAPFYFELLL 360
361 WICGISGENV RKVRWAFLTV RLLRVLRVIR IAKLGRFSPG LANFALTIRK SKKQMQMVGV 420
421 VMMTVIIFFS TLIYFLERDE PGTKFTSIPA TFWWCVVTMA TVGYGDLVPV TVAGKLVGSG 480
481 AIVCGVMVLA LPITIMVNNF MQVVKLREEE IVKKYAQGDQ V
|
| Detection Method: |  |
| Confidence: | 84.69897 |
| Match: | 2a79B |
| Description: | Mammalian Shaker Kv1.2 potassium channel- beta subunit complex |
Matching Structure (courtesy of the PDB): |
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