| Protein: | CE30308 |
| Organism: | Caenorhabditis elegans |
| Length: | 335 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE30308.
| Description | E-value | Query Range |
Subject Range |
|
|
197.0 | [0..2] | [307..173] |
|
Region A: Residues: [1-85] |
1 11 21 31 41 51
| | | | | |
1 METPIMQEGV EKEITPRPIM VQPMGGMKPI KSASNPPTPL DSPFMAGAIN RPRTSTRSVG 60
61 VSIPIHVEGE EPTAPKSIVP DNWID
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [86-335] |
1 11 21 31 41 51
| | | | | |
1 CPFKEHGCHK KGENSEVKRH VRDDRNLHLV LLCQSLNPIR TKINIQQSAY VDKYVGMLQY 60
61 MSIAESAFEK YGSQHTFRIP KIGLTVVKAT KNKSHRSIYS QPFYSHGYGY KMMAVAAPYG 120
121 DGLAFREYFS VFVCLMKGEW DDILEWPFRC DVTFSILSDD KKELLTKTIY VNEMPEIQEF 180
181 LERPEGLRNG TFGFQNFLPL AKVTEFAADG DIFIQIKVLL SKEKQKTQAK EVDSSECQSE 240
241 MVGSSKAKSE
|
| Detection Method: | |
| Confidence: | 30.69897 |
| Match: | 1flkA |
| Description: | TNF receptor associated factor 3 (TRAF3); TRAF3 |
Matching Structure (courtesy of the PDB): |
|
