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View Structure Prediction Details

Protein: csnk-1
Organism: Caenorhabditis elegans
Length: 407 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for csnk-1.

Description E-value Query
Range
Subject
Range
gi|91080121 - gi|91080121|ref|XP_967736.1| PREDICTED: similar to CG4006-PA, isoform A [Tribolium castaneum]
300.0 [0..1] [382..138]

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Predicted Domain #1
Region A:
Residues: [1-407]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTNTRGSNSA TSASTTNSQG VLMVGPNFKV GKKIGCGNFG ELRLGKNLYN NEHVAIKLEP  60
   61 MKSKAPQLHL EYRFYKLLGQ AEGLPQVHYF GPCGKYNALV MELLGHSLED LFDLCDRHFS 120
  121 LKTVAMVAMQ LIRRIEYVHT KHLIYRDVKP ENFLIGRYST RKQHVLHIID FGLAKEYIDC 180
  181 DTGKHIAYRE HKSLTGTARY MSINTHLGKE QSRRDDLEAL GHMFMYFLRG SLPWQGLKAD 240
  241 TLKERYQKIG DTKRQTAVEV LCEGFPDEFA QYLRYARRLD FFETPDYDFC YNLFKSVLDR 300
  301 LGATYDYEFD WTPKLNNVST PSGSLHTSES KDVKRTDRGE LKVSQAAAHA QFGSTQVINS 360
  361 NAGEVVEESR NTEGRTAAGD NSSGEVKCCC FRRRRRKHNN ATPATQK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 59.69897
Match: 2chlA
Description: No description for 2chlA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle