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View Structure Prediction Details

Protein: CE29830
Organism: Caenorhabditis elegans
Length: 672 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE29830.

Description E-value Query
Range
Subject
Range
gi|39579709, gi|... - gi|39579709|emb|CAE56255.1| Hypothetical protein CBG23896 [Caenorhabditis briggsae], gi|187040671|em...
892.0 [0..1] [672..1]

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Predicted Domain #1
Region A:
Residues: [1-672]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPGEKRVKYI LVTGGVISGV GKGIISSSLG VLLKNNGYKV SAIKIDPYLN EDAGTFSPYE  60
   61 HGEVFVLDDG GEVDLDLGNY ERFLDIRLTR DNNITTGKMF KHVMERERRG DYCGKTVQMI 120
  121 PHLTDAIVDW IERVARIPVD GTSEQPDVCI IELGGTIGDI EGMTYLSAFE RFQRPTLKND 180
  181 LMNVHVSLIL HPNATGEPKT KPMQNSVRHL RAAGLVPDLL ICRSTEKLDP HLREKIAGFG 240
  241 MMDLEQVVGV HDVSNIYKVP LLLQQQGVLE AITQRLRLSE ISENIRKDLK FNMNHWTNLS 300
  301 ELCDTFQQVV NIALVGKYVK IADAYASVNK ALSHAAIHAK RKLKITYVDS ELLENKPGME 360
  361 EQSRAAWDSV KAADGVIVPG GFDKRGVEGM INAAEYCRKN DVPYLGVCLG MQVAAIEFAR 420
  421 NVLSIDGANS TEFNSKLHEN QQIVIDMPEH NVEEKGLGGT MRLGRRSTVF LTDECILHRL 480
  481 YGTHTVEERH RHRYEVNPHV VPQMARKGFL FVGMGVDEQN TDIWDVKKRT DSSAELMQMA 540
  541 DQTEIDLLHK IDDLCQRGGD GVTRPAVRME MFEMKDHPYF VGAQFHPEYL SHPLTPSPPF 600
  601 FGLLLAATRQ LNSYFSGSRS PALQVVNEEE HLHHTKENDS EEKREDVVGA MLGKLKLEGN 660
  661 AVPGTQRLAS FH

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 1000.0
Match: 1vcoA
Description: Crystal Structure of T.th. HB8 CTP synthetase complex with Glutamine
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
hydrogen ion transporting ATP synthase activity, rotational mechanism 3.31067140196309 bayes_pls_golite062009
carbamoyl-phosphate synthase activity 3.20040964426687 bayes_pls_golite062009
carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity 3.1924950908778 bayes_pls_golite062009
carbon-nitrogen ligase activity, with glutamine as amido-N-donor 2.70451256281397 bayes_pls_golite062009
hydrogen ion transmembrane transporter activity 2.38022153735887 bayes_pls_golite062009
monovalent inorganic cation transmembrane transporter activity 2.22928921532687 bayes_pls_golite062009
substrate-specific transporter activity 1.90285342513072 bayes_pls_golite062009
substrate-specific transmembrane transporter activity 1.8179707949172 bayes_pls_golite062009
binding 1.80700250246233 bayes_pls_golite062009
ion transmembrane transporter activity 1.58983962677151 bayes_pls_golite062009
phosphoribosylformylglycinamidine synthase activity 1.51568729563523 bayes_pls_golite062009
inorganic cation transmembrane transporter activity 1.50403004795816 bayes_pls_golite062009
cation transmembrane transporter activity 1.38266739305428 bayes_pls_golite062009
catalytic activity 1.00104173493322 bayes_pls_golite062009
CTP synthase activity 0.554689818807922 bayes_pls_golite062009
anthranilate synthase activity 0.243205818526006 bayes_pls_golite062009
nucleic acid binding 0.216266069700019 bayes_pls_golite062009
nucleobase, nucleoside, nucleotide kinase activity 0.12351419478929 bayes_pls_golite062009
protein binding 0.071010918255742 bayes_pls_golite062009
nucleotide binding 0.0593371872166591 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle