| Protein: | snf-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 617 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for snf-1.
| Description | E-value | Query Range |
Subject Range |
|
|
521.0 | [0..11] | [610..288] |
|
Region A: Residues: [1-559] |
1 11 21 31 41 51
| | | | | |
1 MWFEESSWSN LRLTDLVEEW RDLWPSKIEF IVSAMAYLFA MTNFLNLPKL ILENGGVAFA 60
61 AAYAIVVGVL CMPTMVMEMS IGQVTGRAPV LAFYHLFPVF RGIGVSQILF TMVVLACMTK 120
121 FLSTLCLFLY YYFWTFHAGR SGLPWLNCKA FPEFVSQPCR EAGSITNITQ INNRLNTIQA 180
181 ESSMMQFLTT LERPSESIAD FKDFQYPILI AQGAIWIAIF VAICFGVRFV GKTVAFVLML 240
241 AFSSLLVFFL RSATLGGVTE ILEIYWKATD WEKLADYQVW RLAIEQAILG TGIGYGAFIT 300
301 MSSYMKRSNN LVCDSIFLSV WHLIISFVQT MSIICIVGYL SMKLGIHPTE LLETGEDQMW 360
361 YMLAYVSYLP KLWSGVLLTI CICTMFSVIT ILALSVLSTF EDAFGENWSK CCRRFFLALF 420
421 VCLFCFGLTV YFATNAGRHA YELATRSIKY CTIYFILTAE LFATAWFYCA HKLGKDLHNM 480
481 MRSRCCSCFG HFFLYFTYLL PILPAGVAFL NALDYKFSSF SAPIHEWKYS EYVGIAIAMV 540
541 PLIPIPLYFF MTILCACCC
|
| Detection Method: |  |
| Confidence: | 50.30103 |
| Match: | 2a65A |
| Description: | Crystal structure of LEUTAA, a bacterial homolog of Na+/Cl--dependent neurotransmitter transporters |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [560-617] |
1 11 21 31 41 51
| | | | | |
1 KGKDHAKTCK RIRTVFAARL QNHHHRDEKA QPIPRYTSNA PGYLLLPQAP LAEPEIYA
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
