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View Structure Prediction Details

Protein: CE29822
Organism: Caenorhabditis elegans
Length: 515 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE29822.

Description E-value Query
Range
Subject
Range
gi|187023988, gi... - gi|39581017|emb|CAE72498.1| Hypothetical protein CBG19677 [Caenorhabditis briggsae], gi|187023988|em...
gi|157758867 - gi|157758867|ref|XP_001671777.1| Hypothetical protein CBG19677 [Caenorhabditis briggsae AF16]
409.0 [0..1] [513..1]

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Predicted Domain #1
Region A:
Residues: [1-189]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHPILNVVVV SFHHKRGCEV EYSHPKLDGT GESGLPDEWH LLPSLALPDG VHNCQKDTIF  60
   61 FLLPSREEPG KSIFGISCYR QIDAKELINK SEDVTRTSVQ KAVCVLSRIP LFGPLKAKLE 120
  121 VITQAYFEQK DFSKVDVLAQ MYTNLCDIFD ENLTGEYFSN LAHHEISIQE LFIRFRHRAL 180
  181 LLFKLFLLE

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [190-374]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RKVLFIAPTG LRLGETMLAI VSMFPKLLEE GLFYATIGVN TSCHFKNVNS KTEGKSEEIV  60
   61 IEEEVGVQLS HDDPLKEKDS CGFPISLFTQ GSSFDPYLSI QSMDLVPKTQ SCIFGATNAL 120
  121 FAMKKDLFDV IVKIEDDGSL VHNHIEFVND TALERVVSLT TADLRFADFI LKKVEEQVKS 180
  181 SNAEF

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [375-515]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DGSDEWIRLQ MKNYLLGLVA TSRSDLQAAI PHFGIAFVNE WRRTKNHKIW VANKHEDLTS  60
   61 VAPGHMFSEQ MGVYDVYLRF EHAVNGVEGA SKVIGTVNTA GKNLGNTIGE TGSRVKAKFS 120
  121 NWWNRKATAQ EGVEEAEEPS E

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle