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View Structure Prediction Details

Protein: gly-17
Organism: Caenorhabditis elegans
Length: 391 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gly-17.

Description E-value Query
Range
Subject
Range
gi|74000823 - gi|74000823|ref|XP_544703.2| PREDICTED: similar to glucosaminyl (N-acetyl) transferase 3, mucin type...
386.0 [0..7] [386..119]

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Predicted Domain #1
Region A:
Residues: [1-391]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIRLKNIILN LAVYLTFVIF ILFIAKALIP RLLENPNQRI HPPTDLLDDL QINCTNILQG  60
   61 FKNENTLELI NTKMIENKMW NSTDRCQTLT SMFRFNKVPL SEEEARFPLS FGLLVYKELS 120
  121 QVLFLLSSIY QPQNEYCIAV GENSAPAFLI LLKELANCFP NVYFMKRPPI KWGSFEIINS 180
  181 VYGCLEFLSH LKSDWKYFQY LSGVDIPLKT NLEMVRILKR LNGTVNIGIS TYEDRLLNGK 240
  241 NKTESPLPLF KSSLSSLIPR KAANYLSSSS VPQQLLEFLR TTWVADEGFW GTLFGNKDLF 300
  301 NVPGSFNFND PLTNGWGNYV SRHQLWVESE CHNYMKDRSC VFGIGDVPNL MKSRALVAHK 360
  361 LYIESEPEAF FCLLKRHRHR TINPDLTSDS L

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 98.39794
Match: 2gakA
Description: No description for 2gakA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle