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View Structure Prediction Details

Protein: bre-5
Organism: Caenorhabditis elegans
Length: 322 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for bre-5.

Description E-value Query
Range
Subject
Range
gi|62088614 - gi|62088614|dbj|BAD92754.1| beta-1,3-N-acetylglucosaminyltransferase bGnT-5 variant [Homo sapiens]
246.0 [0..3] [322..3]

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Predicted Domain #1
Region A:
Residues: [1-322]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFLCVRILKR KYHELSSFQK LLIFTITIFL LWVLGVVDKF RETSFGDFSW PLETRNLQLR  60
   61 SKFTKYPQCK FSGNGQKIII IIIKSSAKNG PMRESVRKTW GVFRMIDGVE VMPIFIVGRV 120
  121 ENMEIMRRID VESEKYKDIL AISDIDSYRN NTLKLFGAID YAANPNQCSS PDFTFLVDDD 180
  181 YLVHIPNLVK FAKTKQKEEL VYEGFVFDTS PFRLKIHKHS ISLNEYPFSR YPPYVSAGAV 240
  241 FLTSETIARF RNSIRKLKMF PFDDVFTGIL AKTVNVAATH NENFIFWCRR VSQKEWDDGV 300
  301 IAVHGYARKD LEYEYSQLNG FE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 23.69897
Match: 2j0aA
Description: No description for 2j0aA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle