YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CE30396
Organism: Caenorhabditis elegans
Length: 238 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE30396.

Description E-value Query
Range
Subject
Range
gi|50760411 - gi|50760411|ref|XP_418010.1| PREDICTED: similar to AMP deaminase 1 (Myoadenylate deaminase) (AMP dea...
272.0 [0..12] [235..1813]

Back

Predicted Domain #1
Region A:
Residues: [1-238]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSKPLALTG GSGSSQLQDD QVLVDALPYL DTEYNEADRQ LAMKLVEHEC KTFRPTKNYL  60
   61 THLPVPDYDA FLTKCMLKEM DRMKKKEEMG KLDMSRCELP APSAVKGVDR KLWAKVLRNA 120
  121 KAQNEHLLMR QINLELMDEY AAESYLQRNK VMEDLLTHAE KELRKTKEAV MEVHANRKMA 180
  181 QLKAGEKVKQ LEQSWVSMVT NNYRMEMENR QIDSDNRKQI KALKLDPTKL DDKEDQEN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 7.0
Match: 2dfsA
Description: No description for 2dfsA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle