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View Structure Prediction Details

Protein: CE30117
Organism: Caenorhabditis elegans
Length: 375 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE30117.

Description E-value Query
Range
Subject
Range
CE04848 - status:Confirmed UniProt:Q7YZH3 protein_id:AAP82639.1
642.0 [0..1] [375..1]

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Predicted Domain #1
Region A:
Residues: [1-110]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRGALQLLLF VGTVTLVASK LHESPYVTEC FDGHYNFRGV CFQCTPCGDF MYELAKCTDT  60
   61 SNTVCGWCGN KPNLDKISDE VLVSYQTKCL MSSLDFIGMT KLKDELVNVF 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [111-231]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DDEKDSEEMI DSNEINYDMA RNSLEDVYDS QEHQLPDPTY EEGDDSSSSE EIGEEEKTDE  60
   61 NEIGSEIVSE KVKAYMIEKS EKVPSSVKIA KGKTTIVSHE EAEATFREIE ALPNPVRKIN 120
  121 Q

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [232-375]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DDYDSSEESN EREIKWDNWV DDQVKPIRTN VEVVEAEEIE EFDQLIAKSL KNRRKILNDE  60
   61 TESSPLFIKN LGSVFVICMG MIIVVTILSI TYALMRAERK EFLGVPTDSQ DYHMIIDSSN 120
  121 YIEKLESKEK QASRHVHVNP VFDV

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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