| Protein: | oat-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 526 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for oat-1.
| Description | E-value | Query Range |
Subject Range |
|
|
318.0 | [0..1] | [519..52] |
|
Region A: Residues: [1-87] |
1 11 21 31 41 51
| | | | | |
1 MSSKSSTSSE EDENFIKDVE DQKVLEVLTS HSKFKSLDDL VELRWYCMLV LIMAEITAFT 60
61 ALASVMVMVF AGANPTVVGC DNTVVNG
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [88-526] |
1 11 21 31 41 51
| | | | | |
1 CHEYYSLKNR SGCTPVLEYQ FESVQVEFNY ICDDAKKVKN TITIQTFGVL VGAAIFGQVS 60
61 DNFGRRKALI ISCIGNAIFN LISSYSPSLF YFMLWRTVSG IFAGGLTVVQ MVYMVENIPR 120
121 HHRMWIQNSI TWSPNLIIFP YIAYLAQNWR TLSVVISATS VLSFLALMLL EESPRWLVQK 180
181 GKLEEARRLL IKIRKTDGLY TSDFEKDLDE VLKIEAEKQV ISSKKSKKYT FIHLFCTWKM 240
241 IAQTMTFIVG IICTNFIVYA LLYNMEKLSG SLYWNSAIIG AARWVVNIVV SIADYQLPWF 300
301 GRRLINHISM IFTLASLAIV AGYVYIGNGG YVVAIGTTVA LAMCSQLFIA KYLMVNELYP 360
361 TAVRNLAVSA VSTMSRVGGM FSPQLFYLSD IAEWIPYAVL VGFQLVDLVL FCITIPETKG 420
421 VHLENHLPPE HKRIFGKRS
|
| Detection Method: | |
| Confidence: | 21.522879 |
| Match: | 1pw4A |
| Description: | Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli |
Matching Structure (courtesy of the PDB): |
|
