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View Structure Prediction Details

Protein: hrg-1
Organism: Caenorhabditis elegans
Length: 194 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for hrg-1.

Description E-value Query
Range
Subject
Range
gi|39597821, gi|... - gi|39597821|emb|CAE68513.1| Hypothetical protein CBG14327 [Caenorhabditis briggsae], gi|187027826|em...
gi|157769341 - gi|157769341|ref|XP_001676491.1| Hypothetical protein CBG14327 [Caenorhabditis briggsae AF16]
240.0 [0..1] [194..12]

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Predicted Domain #1
Region A:
Residues: [1-194]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHQIYSSDVS SITSKSSIAK AEIITMEEEQ QRQSCCTWFH SLKVQIWIAW LGVSAGVMAG  60
   61 TVFAIQYQNW IAVTMCFISS GFATLVLHLH LAYKKTQMAG WSETRLRCLA AVGATVSFLS 120
  121 FIAMVFCLVV AGIEHQTLDK QGLMGANLWI AAVWFFMTSK WSALTWRFAR KYRAFCEESQ 180
  181 PLLAAAPPEY SVTI

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle