| Protein: | kqt-2 |
| Organism: | Caenorhabditis elegans |
| Length: | 675 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for kqt-2.
| Description | E-value | Query Range |
Subject Range |
|
|
415.0 | [0..62] | [665..62] |
|
Region A: Residues: [1-434] |
1 11 21 31 41 51
| | | | | |
1 MPKYVALSVD FQHPNVCYQL TRLNGNKVTL GAHIVAISMH SLTIDDAEDS ETEVSDNIRR 60
61 RSTINLGNQR QRNLRRIRLK VYNFLEKPLN AASAPYHFFI FGLVIANIIL GAATNDNDST 120
121 VSKIHFFLEI FMIVFFILEF AVRLWSVRAD AKYRTKYGRL YYLFHTVTLI DILIIPATIL 180
181 LLVFKGHDVD GSTLDTLRFI QILRLFHVDR QMATWKLLRK MIILGKWQLM ATYYITLVVG 240
241 LSLATIVYST EALAQGIQDN GYGLIVPEGT NATFPTMAHS WWFTAVTVMT VGYGDIYPVG 300
301 ALTKFLVCVL GFIAFCTFQA ANTQISVGLT LMMEEENKNQ QTNRLRNLAA STIQCWWRYH 360
361 LATNWKPPRR YTYFVHVCYK LYVTEERINQ NRVLAKKLRE KLEKKRPIKK KSLTHQNSVT 420
421 AEILKFGFKG MAKP
|
| Detection Method: |  |
| Confidence: | 60.154902 |
| Match: | 2a79B |
| Description: | Mammalian Shaker Kv1.2 potassium channel- beta subunit complex |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [435-567] |
1 11 21 31 41 51
| | | | | |
1 MLEKQDSFDK AERKISLRRT RKRVLFAEAR NSSVETSMSS SVDVSELETQ FEITNFLEQN 60
61 VDELSSKEVD ISLLIKYRPL LRFYYFVMFR FIMNKFHTQR IAGQLLMIEA EIAERENQRN 120
121 QKMKELEAAI LEL
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [568-675] |
1 11 21 31 41 51
| | | | | |
1 TGKPTVSPFD DSGQKLSIIE RLEFCEKRME DLERKTDALN EITIKCLNLM MMDTQEAASR 60
61 TKDEQGLPPK PPSANNKKQR TIGPRRQVTI VDQYDTLDDC ETVSLDRV
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
