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View Structure Prediction Details

Protein: CE29973
Organism: Caenorhabditis elegans
Length: 334 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE29973.

Description E-value Query
Range
Subject
Range
gi|90411273, gi|... - gi|90411273|ref|ZP_01219285.1| cyclopropane-fatty-acyl-phospholipid synthase [Photobacterium profund...
226.0 [0..6] [303..100]

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Predicted Domain #1
Region A:
Residues: [1-334]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSINMNANFL KLLTHFRRHD LTNFKSEHDT LYEKALETGD HLEVTSHYYS VMSTVIDEYF  60
   61 GGNFHFVPPK FEGQKLEEAL KSLHCHIAEK LELSENVHCL DIGCGIGGVM LDIADFGAKL 120
  121 TGVTIAPNEA EIGNEKFANM GISDRCKIVA ADCQKMPFED STFDVAYAIY SLKYIPNLDK 180
  181 VMKEIQRVLK PGGKFIVYDL IKTNDYDKDN KEHYKTLHHL EYACGMPSLH TQSEVEAAAE 240
  241 KWEMPVVERE NLEETYGNRA FHYCFSASPM FMWLVSSPVI DHTIRMAEIL RILPAGFKQF 300
  301 NRTFLCGTVN SIVGGGRMGI LSGADILLFE KKKI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 39.522879
Match: 1kp9A
Description: CmaA1
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.25333584501255 bayes_pls_golite062009
transferase activity 1.07321114919891 bayes_pls_golite062009
transferase activity, transferring one-carbon groups 0.644010137949015 bayes_pls_golite062009
methyltransferase activity 0.635463629299812 bayes_pls_golite062009
S-adenosylmethionine-dependent methyltransferase activity 0.181420092548185 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle