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View Structure Prediction Details

Protein: tre-1
Organism: Caenorhabditis elegans
Length: 567 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for tre-1.

Description E-value Query
Range
Subject
Range
gi|157123786, gi... - gi|157123786|ref|XP_001660294.1| alpha,alpha-trehalase [Aedes aegypti], gi|108874220|gb|EAT38445.1| ...
460.0 [0..2] [566..45]

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Predicted Domain #1
Region A:
Residues: [1-567]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLYTVINLLA QIYCNGPILQ TVQDSHMFPD SKHFVDMSLK YDPITTLRHF DELGDRTSDM  60
   61 IILREFVTSH FNPPGSELVE WFPPDWVDFP SNFLNIHDYH HRRWALHLHR IWKDLCRKVR 120
  121 DDVKHRQDHY SLLYVPHPFI IPGGRFLEFY YWDTFWILKG LLFSEMYETA RGVIKNLGYM 180
  181 VDNHGFVPNG GRVYYLTRSQ PPLLTPMVYE YYMSTGDLDF VMEILPTLDK EYEFWIKNRQ 240
  241 EWFKDKDGVK QFPYYQYKAK LKVPRPESYR EDSELAEHLQ TEAEKIQMWS EIASAAETGW 300
  301 DFSTRWFSQN GDTMHRMDSI RTWSIIPADL NAFMCANARI LASLYEIAGD FKKVKVFEQR 360
  361 YTWAKREMRE LHWNETDGIW YDYDIELKTH SNQYYVSNAV PLYAKCYDDD DDIPHRVHDY 420
  421 LERQGLLKYT KGLPTSLAMS STQQWDKENA WPPMIHMVIE GFRTTGDIKL MKVAEKMATS 480
  481 WLTGTYQSFI RTHAMFEKYN VTPHTEETSG GGGGEYEVQT GFGWTNGVIL DLLDKYGDQF 540
  541 ASSSTASKFS FSLSNITFVV FILYIFS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 96.39794
Match: 2jf4A
Description: No description for 2jf4A was found.

Predicted functions:

Term Confidence Notes
trehalase activity 8.21995956919006 bayes_pls_golite062009
alpha,alpha-trehalase activity 8.15034892377685 bayes_pls_golite062009
hydrolase activity, hydrolyzing O-glycosyl compounds 2.91663376644963 bayes_pls_golite062009
hydrolase activity 1.70627242352696 bayes_pls_golite062009
hydrolase activity, acting on glycosyl bonds 1.61226907827219 bayes_pls_golite062009
catalytic activity 1.16285856935495 bayes_pls_golite062009
binding 0.614457867010069 bayes_pls_golite062009
protein binding 0.31260719357226 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle