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View Structure Prediction Details

Protein: acl-4
Organism: Caenorhabditis elegans
Length: 410 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for acl-4.

Description E-value Query
Range
Subject
Range
acl-4 - status:Confirmed UniProt:Q9N5S8 protein_id:AAF39831.1
337.0 [0..1] [410..211]

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Predicted Domain #1
Region A:
Residues: [1-317]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEAIIEDEVT SRFEAEQLVS WNMLTRTSIK FYQFVNWKLS ALWILGFMFR YCVMLPLRFT  60
   61 VFCIGLVFLI SSTALIGLVP IGNWKKALNH KCMLICYRIL SRSLTAVVYF HDEHYKAQAQ 120
  121 GICVANHTSP IDALILSIDN VYALIGQKHE GLLGIVQRAL SRASSHIWFE RSEAKDRLVV 180
  181 AQKLKEHCTN PDKLPILIFP EGTCINNTSV MMFKKGSFEI GTTIYPIAMK YDSRFGDAFW 240
  241 NSSEQSWCGY IMRMMTSWAI ICNVWYLPPM TRRDGEDAVD FANRVKKEIA NKGGLVDLEW 300
  301 DGGLKRAKVP PKMVAKQ

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 4.15
Match: 1k30A
Description: Glycerol-3-phosphate (1)-acyltransferase
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [318-410]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QERYANRLSR YTSVSEVVKD EDVDVTSDSS SDLVDKPVSG YNSLEDLPED VFIDEEEDET  60
   61 IDAHDENEND DPAGESNILP NKPLSDTVSL VKT

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 5.221849
Match: 2ekfA
Description: No description for 2ekfA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle