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View Structure Prediction Details

Protein: ags-3
Organism: Caenorhabditis elegans
Length: 589 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ags-3.

Description E-value Query
Range
Subject
Range
gi|73959395 - gi|73959395|ref|XP_866421.1| PREDICTED: similar to Pins isoform 4 [Canis familiaris]
322.0 [0..3] [589..21]

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Predicted Domain #1
Region A:
Residues: [1-589]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQDRSCYKLT QEGERLFRMQ KYEKGIDLLK KALEVGTDDF SLLSAIYCQL GNAHTMLKDY  60
   61 EQALKFHTYD ILVERLLGNK EGEAKSCANL GNIFKMKGAY NDALTFTFKQ LDFAEELGDR 120
  121 PTMRLLNEIY VLKSRAYYNI ATIYVERGRC TKLEAAEEKN DAKNAEATSD FENAAKYFML 180
  181 NLEMSEKSED ALTMGRCYGS LGNTYYCLGD YDQSIHFHKL RLELSQQYGD RASMRRAHAN 240
  241 IANCHALKSN MPLAIQHYKL AYNLAIEIGN KTEEAQMAYS LANALYIGKE VQKAITYFQR 300
  301 HLKIARSLED ISGQLRSYYS LALSFNNLCE RRKALYFLVL AKRSSLQVND TSALTDIDNL 360
  361 LNEILEAGQE DVLVDDIELI IDESADPAPA DIEHRELRLT YFQKRNIHDK PVNTPEDPLA 420
  421 EDRYEKEEFF DMLAKLQSKR MNDQRVDASV LSSNLDFRVR QVDTEPDNSS TDGSEVLIDL 480
  481 LLNAQGRRMD DQRAPFLPGL NPNGQIILRR LNTDPGNEEL DEHLVEWLMR VQGERLDEQR 540
  541 SELPPIKPEG QEEVDKKKEE DVTAIVMRMQ AGRLEDQRAH LPNIPTSKN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 28.522879
Match: 2gw1A
Description: No description for 2gw1A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle