| Protein: | CE30520 |
| Organism: | Caenorhabditis elegans |
| Length: | 608 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE30520.
| Description | E-value | Query Range |
Subject Range |
|
|
350.0 | [0..3] | [608..95] |
|
Region A: Residues: [1-208] |
1 11 21 31 41 51
| | | | | |
1 MIPFLVFIFI LFTPIKSDLW AETERMPDLQ QWRALCGYYA VATAYMKDSN ARVTVFAPVD 60
61 DVFTYNPTIR AMDQKETLSH IVDSQVVELT QNKLWDKQTL IRSTINSGYT YITQFENNPG 120
121 NFSYFANAGM MCNHASNQWG IISGEQYLFK ICTPMGHRPY PGTALSFIRE HDGSVFEERQ 180
181 YNNRDLSQIR DILDRTPDIA LVIYGSSA
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [209-271] |
1 11 21 31 41 51
| | | | | |
1 WNGFHTFFIP NDAAFARVID RNRIDREVLL AHVTSTNRVL FTWPWLYDGG QHYYPSVRFS 60
61 ANI
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [272-608] |
1 11 21 31 41 51
| | | | | |
1 IEDNFKLKLV MRNITDRRTG KWDRQIVRNY FSATGGLVTF FAPWNEAFDR IPEQIERRLL 60
61 RDRIWLEQIL KLHIVPAKEL TSDEITNETI VNTVDNMRQL YFIKGEWPTN NVTYYVIGGG 120
121 IKTAIMMDNV AATNGIVHYI ERVLGVPYQS LWEIMRNESR IQASFHMMSN LQLRYSMDPW 180
181 QVLTPEQNFT FFVPTNEAWH KQSTSLVARM NDGNHWQALQ YVYKRHIVQG QALMYTDLRE 240
241 RTYVMMNDEK VVIRRRGRFF ELYWPRGDRR AQVLEGGEIA GINGYMHMID SVLIYEPDLR 300
301 AHACTTEPVF LQFLVVCLVM VWRPGWFTPF YTVFFYR
|
| Detection Method: | |
| Confidence: | 34.522879 |
| Match: | 1o70A |
| Description: | Fasciclin I |
Matching Structure (courtesy of the PDB): |
|
